CDS

Accession Number TCMCG007C04616
gbkey CDS
Protein Id XP_009140235.1
Location join(931725..932017,932198..932312,932380..933355,933462..933502,933598..933636)
Gene LOC103864202
GeneID 103864202
Organism Brassica rapa

Protein

Length 487aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009141987.3
Definition nuclear pore complex protein NUP58 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description Hydroxyproline-rich glycoprotein family protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14307        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005048        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008139        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042277        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGTCGTTCAATCTATTCTCCACCCCACAACAGCCCCAGCAACAGACAACAACTCCTTCTCCCTTTCAAACTCAATCGTTTCAGCCGCAGACCAACTCCTTCTTCTCCCAACCTCCACAGCAGCAGCAGCAAACGCCGTCGTTTCAGCCGCAACAGTTCCAACAGCAGCAACAACAACAACAGCAAGTACAGCAGCTGTATCTCTTCACGAACGACAAAGCTCCGGCGAGTTATGGCACCAAGTGGGCCGATCTTCACCCCGATTCTCAAAAACTCCTCCTTCAGATCGAAGGGAAGGTATTGGAGTACAGAAGCGAGAGTCAGAGGTTAGACCAATGCAGTCGTCTTTACGATTCCTCTGTTTCAACCGAAGGGTTCGAGTTTGATGCTAGCCGCATTGTTCAGGAGCTTGGTGGGATTAACACTACAATGGACAGACAGAAAGCTGTTCTCCACGAGCTTATGGTGGTTGTTAAAGACATGCTGCGTGATTCCGAGGTTGCTGTTCGGTCTTTCATCATGCTACAGCCAAGATTCCCTCAATCTAAGCCAGCTGGAGGAGGAGGAGTTGTTGGTGGTGGTGGTTCTCAGTCGTCTCAGGGAGCTAACCAGGCTCCAGCTTCTTCTGGTCATCAACAACAAGGAGTTGCTTCTGTTGTTCAAGTTTCTGATTTTTACCGTGGGGTTCCGAGGAAGCCTACTGTTTTCTTACAGCAGACGGTTGCGAGGTTTGAGAAGTATCTAGGCGAGTGTAGACAGTGGGTTGAGGAGCTGGAGCAGCTGCTTGCTTTGGATTCCGACAAGTTTAGTCGGCATGTTTCTCTTTTGGAGTCTCTTCCGAAAGTCATCTCTAACGTCCATGACTTCTTTGTTCATGTCGCTGCTAAGGTTGAGAATATTCACCAATACATTGAGTCGATGAGGACGGCGTATCTTGCTGACCAGCGGCGGAGAGGAGAGTGCCATGATCCGTTTCTTGAGGCTGATCGGAGGGAAACAGCGAAACAAGAAGCTGCTGCTAAAAGGGTCCATCCAACTCTGCATCTACCTGCTAATACTGCTACAAGTACACAAACCTCAACTCAAGTAGCTGGATTGATTACCAGCTCAAATGCTCCACCAACATCTTCAGCCTTTCCAACACCAAACCCTTCTTCAGGAGGTGGGTTGTTTCTTAGCACGCCTGCTTCTGCTGCACCTGCGACTTCTCTCTTTGCTACACCATCTTCCGCTGCTCCTAGCTCTTCTTTGTTTGGAGCAGCAACTACTCCTTCGCAGACACCACTCTTTGGTTCTTCACCAGCTCCTGCATTTGGTTCTGCTCCGTCTTTGTTTGGACAGCCAACTCCATCTATTGCTGCTACTCCTTCACAGTTTGCAGGTATTACACCGGGTTCAGGAGCCAGCTTCGGTTCTATGACTAAATCTTCAAGGCCAAAATCTAGAACTTCCCGCCGTTAG
Protein:  
MSSFNLFSTPQQPQQQTTTPSPFQTQSFQPQTNSFFSQPPQQQQQTPSFQPQQFQQQQQQQQQVQQLYLFTNDKAPASYGTKWADLHPDSQKLLLQIEGKVLEYRSESQRLDQCSRLYDSSVSTEGFEFDASRIVQELGGINTTMDRQKAVLHELMVVVKDMLRDSEVAVRSFIMLQPRFPQSKPAGGGGVVGGGGSQSSQGANQAPASSGHQQQGVASVVQVSDFYRGVPRKPTVFLQQTVARFEKYLGECRQWVEELEQLLALDSDKFSRHVSLLESLPKVISNVHDFFVHVAAKVENIHQYIESMRTAYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPANTATSTQTSTQVAGLITSSNAPPTSSAFPTPNPSSGGGLFLSTPASAAPATSLFATPSSAAPSSSLFGAATTPSQTPLFGSSPAPAFGSAPSLFGQPTPSIAATPSQFAGITPGSGASFGSMTKSSRPKSRTSRR